Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914133.1_cds_XP_016464161.1_57223
CDS Infomation

[gene=LOC107787150] [db_xref=GeneID:107787150] [protein=protein PLASTID TRANSCRIPTIONALLY ACTIVE 10-like] [protein_id=XP_016464161.1] [location=complement(join(53079..53523,55536..55687,56403..56453,56523..56699,57086..57178,57329..57395,57564..57637,58344..58425,58524..58597,59399..59428,59536..59595,59913..60656))] [gbkey=CDS]
Sequence

ATGCAAATTCTTCAAACCTCTTCTTTGTTCTTCACATTCCCATCTTCTAAAACCCTCCTT
AAACCCCAATCTTCAAAATTCAATTCTTTTTCTTTCTTCCCCTGTTCTTTATCCAAGCCT
TCCCGACCTCTTACACTTAACTGTTTCAGTTCAGATGAATTCCCAGTAGGTGATGACGAC
GCATTCCTTGAAGCATTTGGGCCCAAAGAGAAAGAATCAGAAGAAGAAGCTCGTCGCAAA
AACTGGGTCGACCGTGGTTGGGCTCCATGGGAAGAAATCCTCTCACCTGAAGCTAATTTC
GCCCGAAAATCACTTAACGAAGGTGAAGAAGTCGCCCTTCAATCTCCTGAAGCTATTGAA
GCTTTTAAAATGCTTAGCCCAAACTACCGAAAAAAGAAAATTTCAGAAATGGGTATAACG
GAAGATGAGTATTACGCTAAGCAATTTGAGATTAAAGGCGAAATTCCTGAGCCTTTGAGT
ACTATGTGGGCTGGGCCTTTAGTGGTTCGTCATGTACCGCCTAGGGATTGGCCGCCGAGG
GGCTGGGAGGTTGATAAGAAGGAATTGGAGTTTGTTAGGGAAGCCCATAAGTTGCAGTCA
GTGAGAGTGGACTATGATAAAGTGGAGGAGATGGTGAAAATGGAAACTGATGATATGGGG
TTGGACCGGTATAAGATGTTCTTGAAGCAGTACAATGAGTGGGTTGCTGCTAATAAGGAT
AGATTGGAACAAGAATCTTATAAGTATGACCAGGATTATTATCCTGGGAGGAGAAAAAGG
GGAAAGGATTACCAAGATGGAATGTATGAACTCCCGTTTTACTACCCAGGACAAATTTGT
GCAGGTAAGGTGACAGCTATACATCTTTATCAAGGAGCATTTGTTGACATTGGAGGTGTT
CATGATGGGTGGGTGCCAATAAAGCGAAATGACTGGTATTGGATCCGCCATCACATAAAA
GTTGGTATGCACGTCATAGTTGAAATTCTGGCTAAACGTGATCCTTACAGGTTTCGGTTC
CCTATTGAGATGCGCTTTATTGATCCTAACATAGATCACCTAATCTTTAATAGATTTGAT
TTTGCGCCTATATTTCACCGCGATGAGGATACAAATCTAGATGAATTGCGCCGTGACTGT
GGAAGACAACCTCTTCCTAGAAAAGACCCTGGAGTCCAAGTCGAAGAAGAACCAATATTA
TCAAATCACCCCTACGTGGACAAGTTATGGCAGATCCATAATGCTGAACAAATGATTCTG
GATGACATGGAGGCAAATCCTGCTAAATATAAAGGCAAAAACTTGACAGAGTTAACTGAT
GATGAAGATTTTGATGAAGAAAATTGCATTGAATACTCCAAAGCTTATTATAAGAAAGCG
TTGCTTCCTAAAATGATTACGAAAGTCAGTGTAAAAGAGCTTGACTTGGAAGCTGCATTT
GCTGAGCGTCAGCACCATAATAAACTAAGAATGGAAGCACAAGAACGAGGAGAGGTGTAC
AAAATTCCCAAGCTGAGACGAAACATTGAAATGGATGAATATGACTTTATCCATTGGCGT
CGGTCCCTTGAAGAAAGAGAGGCTCTGTTAAGAGATATAAGCTGTCGGCGAGCACTGGGG
CTTCCACTGGAAGAGCCCGGTAGGTATGTGGATCCAAGTGCTTTTGGAAAGGATCAGTAT
GATCCTGACAGTCCCTTGTATAGATATGACTACTGGGGTGAGCCAAAGAACTCAGAGAAG
AGCAAGCAGGAGCGAATGACGGATGCTCACAATAAATCTATTGTTGGTAAAGGTACTGTT
TGGTATGAAATGGCATATGAAGATGCTGTCAAGGAGCGGATGCAGATGGAGGCCCAAGGA
ATAGTGCGGGAATTGTATGATGAGGATTCTGACAGCGATGAAGTTGGTACTGATGATGAC
GATGATGATGAAGAAGACTTTGATTACAGCATCCTTGGCGACCCAAGTGCGAATGTATCC
AACCAACCTTACGTCAATGGGACTGAATCTCGGCTATCAGATGAAGGAATGTTTGAAGAT
AAGTCATAG

Peptide Sequence

PEP ID

XP_016464161.1
PEP Infomation

PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 10-like [Nicotiana tabacum]
Sequence

MQILQTSSLFFTFPSSKTLLKPQSSKFNSFSFFPCSLSKPSRPLTLNCFSSDEFPVGDDD
AFLEAFGPKEKESEEEARRKNWVDRGWAPWEEILSPEANFARKSLNEGEEVALQSPEAIE
AFKMLSPNYRKKKISEMGITEDEYYAKQFEIKGEIPEPLSTMWAGPLVVRHVPPRDWPPR
GWEVDKKELEFVREAHKLQSVRVDYDKVEEMVKMETDDMGLDRYKMFLKQYNEWVAANKD
RLEQESYKYDQDYYPGRRKRGKDYQDGMYELPFYYPGQICAGKVTAIHLYQGAFVDIGGV
HDGWVPIKRNDWYWIRHHIKVGMHVIVEILAKRDPYRFRFPIEMRFIDPNIDHLIFNRFD
FAPIFHRDEDTNLDELRRDCGRQPLPRKDPGVQVEEEPILSNHPYVDKLWQIHNAEQMIL
DDMEANPAKYKGKNLTELTDDEDFDEENCIEYSKAYYKKALLPKMITKVSVKELDLEAAF
AERQHHNKLRMEAQERGEVYKIPKLRRNIEMDEYDFIHWRRSLEEREALLRDISCRRALG
LPLEEPGRYVDPSAFGKDQYDPDSPLYRYDYWGEPKNSEKSKQERMTDAHNKSIVGKGTV
WYEMAYEDAVKERMQMEAQGIVRELYDEDSDSDEVGTDDDDDDEEDFDYSILGDPSANVS
NQPYVNGTESRLSDEGMFEDKS

Transcript Sequence

Gene sequence data has not been registered.